Hopefully it's okay to revive this thread from earlier this year.
I really wanted to help others who have come across issues like this, especially with a program like ThrottleStop.
My theory is that this program somehow permanently changes certain BIOS options. This theory comes from an issue I've had with my Alienware 17R5 not reverting back to defaults (for core ratios, C1E, EIST settings) even after uninstalling ThrottleStop.
Those who have one of these Alienware laptops knows that it has very limited BIOS options when it comes to modifying CPU features, frequencies, voltages, C-States, everything you would expect to be able to change on a performance laptop.
Moreover, changing settings using a program like ThrottleStop seems to somehow lock the BIOS into unchangable modes that persist, even through a reinstallation of Windows (as I learned).
I have remedied my problem by setting the BIOS to default options.
This is certainly a pain to someone who has carefully customized the BIOS on a desktop or a power-user-friendly laptop, but for me with my Alienware, it was easy (I only really change about 2 or 3 settings from default).
The only reason I really found this solution was because I was so discouraged by the poor thermal performance (and then not being able to switch back to default behavior), I was ready to sell my laptop to anyone wanting to buy it. I reset the BIOS as a prerequisite as I do with any desktop/laptop before sale, and when I reinstalled Windows, I noticed that HWiNFO was reporting stock clocks again, as well as a lower idle power usage.
Since this discovery, I have switched to Intel XTU. That program is much friendlier than ThrottleStop, and allows you to actually change the voltage offset (for some reason ThrottleStop could not change the offset on my Core i9-8950HK). These changes also persist similar to ThrottleStop, however, they do not modify C-States or EIST values in the BIOS.
Anyhow, hopefully this helps someone else who has experienced this issue!